Sorting data set 20000214 tetrode D (channels 10, 11, 13, 14)
Table of Contents
- 1. Introduction
- 2. Tetrode D (channels 10, 11, 13, 14) analysis
- 2.1. Loading the data
- 2.2. Five number summary
- 2.3. Plot the data
- 2.4. Data normalization
- 2.5. Spike detection
- 2.6. Cuts
- 2.7. Events
- 2.8. Dimension reduction
- 2.9. Exporting for
GGobi - 2.10. kmeans clustering with 3
- 2.11. Long cuts creation
- 2.12. Peeling
- 2.13. Getting the spike trains
- 2.14. Getting the inter spike intervals and the forward and backward recurrence times
- 2.15. Testing
all_at_once
- 3. Analyzing a sequence of trials
- 4. Systematic analysis of the 21 trials from
Citral - 5. 120 trials with
Cherry - 6. 60 trials with
Octaldehyde
1 Introduction
This is the description of how to do the (spike) sorting of tetrode D (channels 10, 11, 13, 14) from data set locust20000214.
1.1 Getting the data
The data are in file locust20000214.hdf5 located on zenodo and can be downloaded interactivelly with a web browser or by typing at the command line:
wget https://zenodo.org/record/21589/files/locust20000214.hdf5
In the sequel I will assume that R has been started in the directory where the data were downloaded (in other words, the working direcory should be the one containing the data.
The data are in HDF5 format and the easiest way to get them into R is to install the rhdf5 package from Bioconductor. Once the installation is done, the library is loaded into R with:
library(rhdf5)
We can then get a (long and detailed) listing of our data file content with (result not shown):
h5ls("locust20000214.hdf5")
We can get the content of LabBook metadata from the shell with:
h5dump -a "LabBook" locust20000214.hdf5
1.2 Getting the code
The code can be sourced as follows:
source("https://raw.githubusercontent.com/christophe-pouzat/zenodo-locust-datasets-analysis/master/R_Sorting_Code/sorting_with_r.R")
2 Tetrode D (channels 10, 11, 13, 14) analysis
We now want to get our "model", that is a dictionnary of waveforms (one waveform per neuron and per recording site). To that end we are going to use the first 60 s of data contained in the Spontaneous Group (in HDF5 jargon).
2.1 Loading the data
So we start by loading the data from channels 10, 11, 13, 14 into R, using the first available trial (50) from the trials with Citral:
lD = get_data(50,"Citral",
channels = c("ch10","ch11","ch13","ch14"),
file="locust20000214.hdf5")
dim(lD)
| 250000 |
| 4 |
2.2 Five number summary
We get the Five number summary with:
summary(lD,digits=2)
| Min. :1725 | Min. :1713 | Min. :1470 | Min. :1703 |
| 1st Qu.:2014 | 1st Qu.:2015 | 1st Qu.:2019 | 1st Qu.:2007 |
| Median :2047 | Median :2049 | Median :2052 | Median :2035 |
| Mean :2047 | Mean :2048 | Mean :2051 | Mean :2036 |
| 3rd Qu.:2081 | 3rd Qu.:2083 | 3rd Qu.:2083 | 3rd Qu.:2065 |
| Max. :2323 | Max. :2311 | Max. :2438 | Max. :2493 |
It shows that the channels have very similar properties as far as the median and the inter-quartile range (IQR) are concerned. The minimum is much smaller on the third channel. This suggests that the largest spikes are going to be found here (remember that spikes are going mainly downwards).
2.3 Plot the data
We "convert" the data matrix lD into a time series object with:
lD = ts(lD,start=0,freq=15e3)
We can then plot the whole data with (not shown since it makes a very figure):
plot(lD)
2.4 Data normalization
As always we normalize such that the median absolute deviation (MAD) becomes 1:
lD.mad = apply(lD,2,mad) lD = t((t(lD)-apply(lD,2,median))/lD.mad) lD = ts(lD,start=0,freq=15e3)
Once this is done we explore interactively the data with:
explore(lD,col=c("black","grey70"))
There are several neurons but not many. The large one of channel 3 is seen on every channel. The signal to noise ratio is not bad. The polarity on the fourth channel seems to be the opposite of the one of the other three. I should be easier to work with the opposite of channel 4 then:
lD[,4]= -lD[,4]
2.5 Spike detection
Since the spikes are mainly going downwards, we will detect valleys instead of peaks:
lDf = -lD filter_length = 3 threshold_factor = 4 lDf = filter(lDf,rep(1,filter_length)/filter_length) lDf[is.na(lDf)] = 0 lDf.mad = apply(lDf,2,mad) lDf_mad_original = lDf.mad lDf = t(t(lDf)/lDf_mad_original) thrs = threshold_factor*c(1,1,1,1) bellow.thrs = t(t(lDf) < thrs) lDfr = lDf lDfr[bellow.thrs] = 0 remove(lDf) sp0 = peaks(apply(lDfr,1,sum),15) remove(lDfr) sp0
eventsPos object with indexes of 205 events. Mean inter event interval: 1185.99 sampling points, corresponding SD: 1283.15 sampling points Smallest and largest inter event intervals: 44 and 8530 sampling points.
Every time a filter length / threshold combination is tried, the detection is checked interactively with:
explore(sp0,lD,col=c("black","grey50"))
2.6 Cuts
We proceed as usual to get the cut length right:
evts = mkEvents(sp0,lD,49,50)
evts.med = median(evts)
evts.mad = apply(evts,1,mad)
plot_range = range(c(evts.med,evts.mad))
plot(evts.med,type="n",ylab="Amplitude",
ylim=plot_range)
abline(v=seq(0,400,10),col="grey")
abline(h=c(0,1),col="grey")
lines(evts.med,lwd=2)
lines(evts.mad,col=2,lwd=2)
Figure 1: Setting the cut length for the data from tetrode D (channels 10, 11, 13, 14). We see that we need 20 points before the peak and 30 after.
We see that we need roughly 20 points before the peak and 30 after.
2.7 Events
We now cut our events:
evts = mkEvents(sp0,lD,19,30) summary(evts)
events object deriving from data set: lD. Events defined as cuts of 50 sampling points on each of the 4 recording sites. The 'reference' time of each event is located at point 20 of the cut. There are 205 events in the object.
We can as usual visualize the events with:
evts
Figure 2: Events for the data from tetrode D (channels 1, 3, 5, 7).
There are very few superposition so we don't try to remove them.
2.8 Dimension reduction
We do a PCA on our good events set:
evts.pc = prcomp(t(evts))
We look at the projections on the first 4 principle components:
panel.dens = function(x,...) {
usr = par("usr")
on.exit(par(usr))
par(usr = c(usr[1:2], 0, 1.5) )
d = density(x, adjust=0.5)
x = d$x
y = d$y
y = y/max(y)
lines(x, y, col="grey50", ...)
}
pairs(evts.pc$x[,1:4],pch=".",gap=0,diag.panel=panel.dens)
Figure 3: Events from tetrode D (channels 10, 11, 13, 14) projected onto the first 4 PCs.
I see at 2/3 clusters. We can also look at the projections on the PC pairs defined by the next 4 PCs:
pairs(evts.pc$x[,5:8],pch=".",gap=0,diag.panel=panel.dens)
Figure 4: Events from tetrode D (channels 10, 11, 13, 14) projected onto PC 5 to 8.
There is not much structure left beyond the 4th PC.
2.9 Exporting for GGobi
We export the events projected onto the first 8 principle components in csv format:
write.csv(evts.pc$x[,1:8],file="tetD_evts.csv")
Using the rotation display of GGobi with the first 3 principle components and the 2D tour with the first 4 components I see at least 4 clusters but there are probably 5 or 6. So we will start with a kmeans with 5 centers.
2.10 kmeans clustering with 3
nbc=3
set.seed(20110928,kind="Mersenne-Twister")
km = kmeans(evts.pc$x[,1:5],centers=nbc,iter.max=100,nstart=100)
label = km$cluster
cluster.med = sapply(1:nbc, function(cIdx) median(evts[,label==cIdx]))
sizeC = sapply(1:nbc,function(cIdx) sum(abs(cluster.med[,cIdx])))
newOrder = sort.int(sizeC,decreasing=TRUE,index.return=TRUE)$ix
cluster.mad = sapply(1:nbc, function(cIdx) {ce = t(evts);ce = ce[label==cIdx,];apply(ce,2,mad)})
cluster.med = cluster.med[,newOrder]
cluster.mad = cluster.mad[,newOrder]
labelb = sapply(1:nbc, function(idx) (1:nbc)[newOrder==idx])[label]
We write a new csv file with the data and the labels:
write.csv(cbind(evts.pc$x[,1:5],labelb),file="tetD_sorted.csv")
It gives what was expected.
We get a plot showing the events attributed to each unit with:
layout(matrix(1:nbc,nr=nbc)) par(mar=c(1,1,1,1)) for (i in (1:nbc)) plot(evts[,labelb==i],y.bar=5)
Figure 5: The events of the six clusters of tetrode D
There is nothing interesting in cluster 3 so we can forget about it and us it as a "trash" cluster.
2.11 Long cuts creation
For the peeling process we need templates that start and end at 0 (we will otherwise generate artifacts when we subtract). We proceed "as usual" with (I tried first with the default value for parameters before and after but I reduced their values after looking at the centers, see the next figure):
c_before = 49
c_after = 80
centers = lapply(1:nbc, function(i)
mk_center_list(sp0[labelb==i],lD,
before=c_before,after=c_after))
names(centers) = paste("Cluster",1:nbc)
We then make sure that our cuts are long enough by looking at them:
layout(matrix(1:nbc,nr=nbc))
par(mar=c(1,4,1,1))
the_range=c(min(sapply(centers,function(l) min(l$center))),
max(sapply(centers,function(l) max(l$center))))
for (i in 1:nbc) {
template = centers[[i]]$center
plot(template,lwd=2,col=2,
ylim=the_range,type="l",ylab="")
abline(h=0,col="grey50")
abline(v=(1:2)*(c_before+c_after)+1,col="grey50")
lines(filter(template,rep(1,filter_length)/filter_length),
col=1,lty=3,lwd=2)
abline(h=-threshold_factor,col="grey",lty=2,lwd=2)
lines(centers[[i]]$centerD,lwd=2,col=4)
}
Figure 6: The three templates (red) together with their first derivative (blue) all with the same scale. The dashed black curve show the templates filtered with the filter used during spike detection and the horizontal dashed grey line shows the detection threshold.
Only unit 1 and 2 should reliably pass our threshold while the third two should be multi-unit…
2.12 Peeling
We can now do the peeling.
2.12.1 Round 0
We classify, predict, subtract and check how many non-classified events we get:
round0 = lapply(as.vector(sp0),classify_and_align_evt,
data=lD,centers=centers,
before=c_before,after=c_after)
pred0 = predict_data(round0,centers,data_length = dim(lD)[1])
lD_1 = lD - pred0
sum(sapply(round0, function(l) l[[1]] == '?'))
2
We can see the difference before / after peeling for the data between 1.8 and 1.9 s:
ii = 1:1500 + 1.8*15000
tt = ii/15000
par(mar=c(1,1,1,1))
plot(tt, lD[ii,1], axes = FALSE,
type="l",ylim=c(-50,10),
xlab="",ylab="")
lines(tt, lD_1[ii,1], col='red')
lines(tt, lD[ii,2]-15, col='black')
lines(tt, lD_1[ii,2]-15, col='red')
lines(tt, lD[ii,3]-25, col='black')
lines(tt, lD_1[ii,3]-25, col='red')
lines(tt, lD[ii,4]-40, col='black')
lines(tt, lD_1[ii,4]-40, col='red')
Figure 7: The first peeling illustrated on 100 ms of data, the raw data are in black and the first subtration in red.
2.12.2 Round 1
We keep going, using the subtracted data lD_1 as "raw data", detecting on all sites using the original MAD for normalization:
lDf = -lD_1 lDf = filter(lDf,rep(1,filter_length)/filter_length) lDf[is.na(lDf)] = 0 lDf = t(t(lDf)/lDf_mad_original) thrs = threshold_factor*c(1,1,1,1) bellow.thrs = t(t(lDf) < thrs) lDfr = lDf lDfr[bellow.thrs] = 0 remove(lDf) sp1 = peaks(apply(lDfr,1,sum),15) remove(lDfr) sp1
eventsPos object with indexes of 11 events. Mean inter event interval: 22387.8 sampling points, corresponding SD: 21605.53 sampling points Smallest and largest inter event intervals: 30 and 68411 sampling points.
We classify, predict, subtract and check how many non-classified events we get:
round1 = lapply(as.vector(sp1),classify_and_align_evt,
data=lD_1,centers=centers,
before=c_before,after=c_after)
pred1 = predict_data(round1,centers,data_length = dim(lD)[1])
lD_2 = lD_1 - pred1
sum(sapply(round1, function(l) l[[1]] == '?'))
3
We look at what's left with (not shown):
explore(sp1,lD_2,col=c("black","grey50"))
We decide to stop here.
2.13 Getting the spike trains
round_all = c(round0,round1)
spike_trains = lapply(paste("Cluster",1:nbc),
function(cn) sort(sapply(round_all[sapply(round_all,
function(l) l[[1]]==cn)],
function(l) l[[2]]+l[[3]])))
names(spike_trains) = paste("Cluster",1:nbc)
2.14 Getting the inter spike intervals and the forward and backward recurrence times
2.14.1 ISI distributions
We first get the ISI (inter spike intervals) of each unit:
isi = sapply(spike_trains, diff) names(isi) = names(spike_trains)
We get the ISI ECDF for the five units with:
layout(matrix(1:(nbc+nbc %% 2),nr=ceiling(nbc/2))) par(mar=c(4,5,6,1)) for (cn in names(isi)) plot_isi(isi[[cn]],main=cn)
Figure 8: ISI ECDF for the three units.
2.14.2 Forward and Backward Recurrence Times
The forward recurrence time (FRT) between neuron A and B is the elapsed time between a spike in A and the next spike in B. The backward recurrence time (BRT) is the same thing except that we look for the former spike in B. If A and B are not correlated, the expected density of the FRT is the survival function (1-CDF) of the ISI from B divided by the mean ISI of B (the same holds for the BRT under the null hypothesis after taking the opposite). All that is correct if the data are stationary.
On the data at hand that gives:
layout_matrix = matrix(0,nr=nbc,nc=nbc)
counter = 1
for (i in 1:nbc)
for (j in 1:nbc)
if (i != j) {
layout_matrix[i,j] = counter
counter = counter +1
}
layout(layout_matrix)
par(mar=c(4,3,4,1))
for (i in 1:nbc)
for (j in 1:nbc)
if (i != j)
test_rt(spike_trains[[i]],
spike_trains[[j]],
ylab="",main=paste("Units",i,"and",j))
Figure 9: Graphical tests of the Backward and Forward Reccurrence Times distrution agaisnt the null hypothesis (no interaction). If the null is correct, the curves should be IID draws from a standard normal distribution.
2.15 Testing all_at_once
We test the function with:
## We need again an un-normalized version of the data
ref_data = get_data(50,"Citral",
channels = c("ch10","ch11","ch13","ch14"),
file="locust20000214.hdf5")
ref_data[,4] = -ref_data[,4]
## We can now use our function
aao=all_at_once(data=ref_data, centers, thres=threshold_factor*c(1,1,1,1),
filter_length_1=filter_length, filter_length=filter_length,
minimalDist_1=15, minimalDist=15,
before=c_before, after=c_after,
detection_cycle=c(0,0), verbose=2)
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1725 Min. :1713 Min. :1470 Min. :-2493
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2323 Max. :2311 Max. :2438 Max. :-1703
Doing now round 0 detecting on all sites
Total Cluster 1 Cluster 2 Cluster 3 ?
205 57 83 63 2
Doing now round 1 detecting on all sites
Total Cluster 1 Cluster 2 Cluster 3 ?
11 3 1 4 3
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
215 60 84 67 4
We see that we are getting back the numbers we obtained before step by step.
We can compare the "old" and "new" centers with (not shown):
layout(matrix(1:nbc,nr=nbc))
par(mar=c(1,4,1,1))
for (i in 1:nbc) {
plot(centers[[i]]$center,lwd=2,col=2,
ylim=the_range,type="l")
abline(h=0,col="grey50")
abline(v=(c_before+c_after)+1,col="grey50")
lines(aao$centers[[i]]$center,lwd=1,col=4)
}
They are not exactly identical since the new version is computed with all events (superposed or not) attributed to each neuron.
3 Analyzing a sequence of trials
3.1 Create a directory were results get saved
We will carry out an analysis of sequences of 30/25 trials with a given odor. At the end of the analysis of the sequence we will save some intermediate R object in a directory we are now creating.:
if (!dir.exists("tetD_analysis"))
dir.create("tetD_analysis")
3.2 Define a "taylored" version of sort_many_trials
In order to save space and to avoid typos, we define next a taylored version of sort_many_trials:
smt = function(stim_name,
trial_nbs,
centers,
counts) {
sort_many_trials(inter_trial_time=10*15000,
get_data_fct=function(i,s) {
res=get_data(i,s,
channels = c("ch10","ch11","ch13","ch14"),
file="locust20000214.hdf5")
res[,4] = -res[,4]
res
},
stim_name=stim_name,
trial_nbs=trial_nbs,
centers=centers,
counts=counts,
all_at_once_call_list=list(thres=threshold_factor*c(1,1,1,1),
filter_length_1=filter_length, filter_length=filter_length,
minimalDist_1=15, minimalDist=15,
before=c_before, after=c_after,
detection_cycle=c(0,0), verbose=1),
layout_matrix=matrix(1:4,nr=2),new_weight_in_update=0.01
)
}
4 Systematic analysis of the 21 trials from Citral
4.1 Doing the job
a_Citral_tetD=smt(stim_name="Citral",
trial_nbs=50:70,
centers=aao$centers,
counts=aao$counts)
***************
Doing now trial 50 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1725 Min. :1713 Min. :1470 Min. :-2493
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2323 Max. :2311 Max. :2438 Max. :-1703
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
216 58 84 69 5
Trial 50 done!
******************
***************
Doing now trial 51 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1686 Min. :1660 Min. :1443 Min. :-2516
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2322 Max. :2305 Max. :2474 Max. :-1700
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
238 75 95 61 7
Trial 51 done!
******************
***************
Doing now trial 52 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1707 Min. :1595 Min. :1466 Min. :-2506
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2291 Max. :2302 Max. :2440 Max. :-1748
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
221 37 126 51 7
Trial 52 done!
******************
***************
Doing now trial 53 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1695 Min. :1689 Min. :1455 Min. :-2510
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2283 Max. :2306 Max. :2441 Max. :-1758
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
161 36 65 51 9
Trial 53 done!
******************
***************
Doing now trial 54 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1682 Min. :1699 Min. :1451 Min. :-2513
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2322 Max. :2348 Max. :2538 Max. :-1732
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
171 45 77 38 11
Trial 54 done!
******************
***************
Doing now trial 55 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1674 Min. :1640 Min. :1359 Min. :-2519
1st Qu.:2014 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2290 Max. :2360 Max. :2421 Max. :-1720
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
215 36 116 59 4
Trial 55 done!
******************
***************
Doing now trial 56 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1701 Min. :1683 Min. :1434 Min. :-2490
1st Qu.:2014 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2296 Max. :2302 Max. :2426 Max. :-1714
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
224 56 103 57 8
Trial 56 done!
******************
***************
Doing now trial 57 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1625 Min. :1386 Min. :1455 Min. :-2586
1st Qu.:2013 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2006
Max. :3182 Max. :2945 Max. :2614 Max. : -833
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
212 55 53 70 34
Trial 57 done!
******************
***************
Doing now trial 58 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1637 Min. :1673 Min. :1399 Min. :-2543
1st Qu.:2012 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2464 Max. :2309 Max. :2449 Max. :-1722
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
220 47 87 70 16
Trial 58 done!
******************
***************
Doing now trial 59 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1729 Min. :1691 Min. :1470 Min. :-2492
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2361 Max. :2293 Max. :2432 Max. :-1732
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
195 19 110 57 9
Trial 59 done!
******************
***************
Doing now trial 60 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1701 Min. :1677 Min. :1489 Min. :-2504
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2294 Max. :2361 Max. :2454 Max. :-1710
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
216 62 94 51 9
Trial 60 done!
******************
***************
Doing now trial 61 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1669 Min. :1653 Min. :1411 Min. :-2509
1st Qu.:2014 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2304 Max. :2324 Max. :2464 Max. :-1721
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
295 76 158 54 7
Trial 61 done!
******************
***************
Doing now trial 62 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1682 Min. :1660 Min. :1353 Min. :-2513
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2302 Max. :2298 Max. :2424 Max. :-1748
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
176 28 79 64 5
Trial 62 done!
******************
***************
Doing now trial 63 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1699 Min. :1686 Min. :1468 Min. :-2485
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2082 3rd Qu.:-2007
Max. :2328 Max. :2313 Max. :2468 Max. :-1728
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
167 32 84 46 5
Trial 63 done!
******************
***************
Doing now trial 64 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1685 Min. :1685 Min. :1460 Min. :-2495
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2329 Max. :2304 Max. :2437 Max. :-1742
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
226 52 113 53 8
Trial 64 done!
******************
***************
Doing now trial 65 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1691 Min. :1703 Min. :1421 Min. :-2516
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2302 Max. :2304 Max. :2494 Max. :-1713
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
243 60 121 51 11
Trial 65 done!
******************
***************
Doing now trial 66 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1689 Min. :1643 Min. :1363 Min. :-2556
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2006
Max. :2299 Max. :2306 Max. :2464 Max. :-1721
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
227 58 96 63 10
Trial 66 done!
******************
***************
Doing now trial 67 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1672 Min. :1685 Min. :1426 Min. :-2520
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2320 Max. :2279 Max. :2461 Max. :-1729
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
205 57 91 55 2
Trial 67 done!
******************
***************
Doing now trial 68 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1688 Min. :1683 Min. :1470 Min. :-2493
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2307 Max. :2314 Max. :2424 Max. :-1745
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
185 72 63 40 10
Trial 68 done!
******************
***************
Doing now trial 69 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1615 Min. :1657 Min. :1295 Min. :-2567
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2386 Max. :2328 Max. :2435 Max. :-1740
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
198 52 80 59 7
Trial 69 done!
******************
***************
Doing now trial 70 of Citral
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1637 Min. :1662 Min. :1391 Min. :-2508
1st Qu.:2014 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2291 Max. :2324 Max. :2481 Max. :-1710
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
241 48 131 55 7
Trial 70 done!
******************
4.2 Diagnostic plots
The counts evolution is:
counts_evolution(a_Citral_tetD)
Figure 10: Evolution of the number of events attributed to each unit (1 to 3) or unclassified ("?") during the 21 trials of Citral for tetrode D.
The waveform evolution is:
waveform_evolution(a_Citral_tetD,threshold_factor)
Figure 11: Evolution of the templates of each unit during the 21 trials with Citral for tetrode D.
The observed counting processes, inter spike intervals densities and raster plots are (we have to do a little of processing since we start at trial 50 and not 1):
for (i in 1:nbc) a_Citral_tetD$spike_trains[[i]] = a_Citral_tetD$spike_trains[[i]]-49*10*15000 cp_isi_raster(a_Citral_tetD)
Figure 12: Observed counting processes, empirical inter spike interval distributions and raster plots for Citral.
4.3 Save results
Before analyzing the next set of trials we save the output of sort_many_trials to disk with:
save(a_Citral_tetD,
file=paste0("tetD_analysis/tetD_","Citral","_summary_obj.rda"))
We write to disk the spike trains in text mode:
for (c_idx in 1:length(a_Citral_tetD$spike_trains))
cat(a_Citral_tetD$spike_trains[[c_idx]],
file=paste0("locust20000214_spike_trains/locust20000214_Citral_tetD_u",c_idx,".txt"),sep="\n")
5 120 trials with Cherry
5.1 Do the job
a_Cherry_tetD=smt(stim_name="Cherry",
trial_nbs=1:120,
centers=a_Citral_tetD$centers,
counts=a_Citral_tetD$counts)
***************
Doing now trial 1 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1672 Min. :1637 Min. :1348 Min. :-2587
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2301 Max. :2324 Max. :2513 Max. :-1705
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
269 70 148 49 2
Trial 1 done!
******************
***************
Doing now trial 2 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1646 Min. :1665 Min. :1413 Min. :-2592
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2339 Max. :2314 Max. :2472 Max. :-1708
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
248 56 148 39 5
Trial 2 done!
******************
***************
Doing now trial 3 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1677 Min. :1670 Min. :1396 Min. :-2552
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2285 Max. :2303 Max. :2473 Max. :-1718
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
177 50 61 61 5
Trial 3 done!
******************
***************
Doing now trial 4 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1615 Min. :1667 Min. :1343 Min. :-2551
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2292 Max. :2326 Max. :2506 Max. :-1714
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
181 38 81 55 7
Trial 4 done!
******************
***************
Doing now trial 5 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1666 Min. :1694 Min. :1396 Min. :-2540
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2385 Max. :2361 Max. :2518 Max. :-1723
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
245 75 97 69 4
Trial 5 done!
******************
***************
Doing now trial 6 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1665 Min. :1672 Min. :1426 Min. :-2561
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2307 Max. :2305 Max. :2523 Max. :-1703
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
223 59 102 56 6
Trial 6 done!
******************
***************
Doing now trial 7 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1643 Min. :1686 Min. :1430 Min. :-2542
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2347 Max. :2319 Max. :2476 Max. :-1721
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
204 65 84 51 4
Trial 7 done!
******************
***************
Doing now trial 8 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1660 Min. :1650 Min. :1370 Min. :-2566
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2317 Max. :2332 Max. :2448 Max. :-1714
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
259 94 104 58 3
Trial 8 done!
******************
***************
Doing now trial 9 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1686 Min. :1669 Min. :1411 Min. :-2523
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2336 Max. :2381 Max. :2501 Max. :-1733
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
190 34 81 69 6
Trial 9 done!
******************
***************
Doing now trial 10 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1646 Min. :1646 Min. :1346 Min. :-2520
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2301 Max. :2339 Max. :2421 Max. :-1693
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
166 39 64 60 3
Trial 10 done!
******************
***************
Doing now trial 11 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1678 Min. :1645 Min. :1435 Min. :-2562
1st Qu.:2013 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2290 Max. :2305 Max. :2508 Max. :-1702
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
281 106 124 47 4
Trial 11 done!
******************
***************
Doing now trial 12 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1595 Min. :1645 Min. :1399 Min. :-2523
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2319 Max. :2328 Max. :2461 Max. :-1710
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
190 60 74 54 2
Trial 12 done!
******************
***************
Doing now trial 13 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1655 Min. :1671 Min. :1436 Min. :-2536
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2300 Max. :2333 Max. :2519 Max. :-1714
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
233 59 116 51 7
Trial 13 done!
******************
***************
Doing now trial 14 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1710 Min. :1693 Min. :1406 Min. :-2518
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2289 Max. :2299 Max. :2451 Max. :-1708
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
195 31 84 69 11
Trial 14 done!
******************
***************
Doing now trial 15 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1671 Min. :1676 Min. :1355 Min. :-2549
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2314 Max. :2321 Max. :2466 Max. :-1707
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
199 43 89 59 8
Trial 15 done!
******************
***************
Doing now trial 16 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1642 Min. :1649 Min. :1430 Min. :-2521
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2310 Max. :2294 Max. :2458 Max. :-1645
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
238 94 85 54 5
Trial 16 done!
******************
***************
Doing now trial 17 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1664 Min. :1628 Min. :1415 Min. :-2535
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2323 Max. :2318 Max. :2435 Max. :-1715
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
189 40 81 66 2
Trial 17 done!
******************
***************
Doing now trial 18 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1663 Min. :1611 Min. :1221 Min. :-2566
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2299 Max. :2346 Max. :2499 Max. :-1684
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
196 46 86 60 4
Trial 18 done!
******************
***************
Doing now trial 19 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1674 Min. :1649 Min. :1409 Min. :-2529
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2345 Max. :2341 Max. :2471 Max. :-1694
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
259 90 109 53 7
Trial 19 done!
******************
***************
Doing now trial 20 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1707 Min. :1689 Min. :1457 Min. :-2523
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2270 Max. :2294 Max. :2437 Max. :-1716
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
162 12 93 49 8
Trial 20 done!
******************
***************
Doing now trial 21 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1685 Min. :1685 Min. :1325 Min. :-2567
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2320 Max. :2363 Max. :2498 Max. :-1683
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
203 48 78 70 7
Trial 21 done!
******************
***************
Doing now trial 22 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1630 Min. :1641 Min. :1317 Min. :-2585
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2366 Max. :2337 Max. :2501 Max. :-1705
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
286 97 121 58 10
Trial 22 done!
******************
***************
Doing now trial 23 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1665 Min. :1651 Min. :1382 Min. :-2540
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2050 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2316 Max. :2317 Max. :2473 Max. :-1703
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
229 90 69 63 7
Trial 23 done!
******************
***************
Doing now trial 24 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1688 Min. :1647 Min. :1389 Min. :-2573
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2324 Max. :2325 Max. :2477 Max. :-1713
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
252 70 125 53 4
Trial 24 done!
******************
***************
Doing now trial 25 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1665 Min. :1682 Min. :1354 Min. :-2540
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2342 Max. :2347 Max. :2603 Max. :-1702
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
203 35 116 47 5
Trial 25 done!
******************
***************
Doing now trial 26 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1683 Min. :1670 Min. :1373 Min. :-2559
1st Qu.:2014 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2050 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2318 Max. :2331 Max. :2501 Max. :-1695
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
248 103 93 47 5
Trial 26 done!
******************
***************
Doing now trial 27 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1648 Min. :1651 Min. :1352 Min. :-2582
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2318 Max. :2302 Max. :2463 Max. :-1692
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
182 36 80 64 2
Trial 27 done!
******************
***************
Doing now trial 28 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1661 Min. :1639 Min. :1354 Min. :-2585
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2321 Max. :2300 Max. :2505 Max. :-1712
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
241 45 135 55 6
Trial 28 done!
******************
***************
Doing now trial 29 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1664 Min. :1675 Min. :1395 Min. :-2576
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2299 Max. :2336 Max. :2500 Max. :-1669
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
219 59 98 58 4
Trial 29 done!
******************
***************
Doing now trial 30 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1699 Min. :1648 Min. :1367 Min. :-2565
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2319 Max. :2326 Max. :2503 Max. :-1698
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
255 77 107 65 6
Trial 30 done!
******************
***************
Doing now trial 31 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1650 Min. :1645 Min. :1389 Min. :-2591
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2306 Max. :2334 Max. :2502 Max. :-1719
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
209 50 87 68 4
Trial 31 done!
******************
***************
Doing now trial 32 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1670 Min. :1678 Min. :1351 Min. :-2556
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2323 Max. :2316 Max. :2485 Max. :-1719
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
222 58 99 61 4
Trial 32 done!
******************
***************
Doing now trial 33 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1630 Min. :1669 Min. :1408 Min. :-2547
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2324 Max. :2313 Max. :2492 Max. :-1688
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
242 50 130 60 2
Trial 33 done!
******************
***************
Doing now trial 34 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1689 Min. :1688 Min. :1369 Min. :-2541
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2315 Max. :2344 Max. :2460 Max. :-1690
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
230 55 108 62 5
Trial 34 done!
******************
***************
Doing now trial 35 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1668 Min. :1679 Min. :1385 Min. :-2571
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2312 Max. :2335 Max. :2470 Max. :-1710
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
277 81 122 67 7
Trial 35 done!
******************
***************
Doing now trial 36 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1686 Min. :1673 Min. :1396 Min. :-2534
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2332 Max. :2291 Max. :2465 Max. :-1694
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
166 31 72 58 5
Trial 36 done!
******************
***************
Doing now trial 37 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1610 Min. :1644 Min. :1278 Min. :-2551
1st Qu.:2014 1st Qu.:2014 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2050 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2336 Max. :2339 Max. :2472 Max. :-1710
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
302 91 150 52 9
Trial 37 done!
******************
***************
Doing now trial 38 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1694 Min. :1661 Min. :1402 Min. :-2588
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2341 Max. :2374 Max. :2518 Max. :-1689
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
153 29 63 58 3
Trial 38 done!
******************
***************
Doing now trial 39 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1620 Min. :1630 Min. :1362 Min. :-2566
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2035
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2332 Max. :2324 Max. :2541 Max. :-1694
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
283 140 91 43 9
Trial 39 done!
******************
***************
Doing now trial 40 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1709 Min. :1677 Min. :1383 Min. :-2561
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2337 Max. :2343 Max. :2588 Max. :-1642
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
207 34 99 67 7
Trial 40 done!
******************
***************
Doing now trial 41 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1602 Min. :1599 Min. :1190 Min. :-2581
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2048 Median :2050 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2006
Max. :2302 Max. :2330 Max. :2550 Max. :-1699
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
274 109 104 54 7
Trial 41 done!
******************
***************
Doing now trial 42 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1688 Min. :1678 Min. :1357 Min. :-2568
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2305 Max. :2302 Max. :2518 Max. :-1683
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
193 58 93 32 10
Trial 42 done!
******************
***************
Doing now trial 43 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1683 Min. :1683 Min. :1405 Min. :-2563
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2322 Max. :2314 Max. :2481 Max. :-1694
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
225 64 87 67 7
Trial 43 done!
******************
***************
Doing now trial 44 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1685 Min. :1692 Min. :1392 Min. :-2557
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2385 Max. :2307 Max. :2519 Max. :-1704
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
228 37 112 76 3
Trial 44 done!
******************
***************
Doing now trial 45 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1604 Min. :1656 Min. :1397 Min. :-2553
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2316 Max. :2347 Max. :2471 Max. :-1717
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
210 40 112 55 3
Trial 45 done!
******************
***************
Doing now trial 46 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1680 Min. :1684 Min. :1407 Min. :-2557
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2315 Max. :2321 Max. :2465 Max. :-1721
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
236 61 87 82 6
Trial 46 done!
******************
***************
Doing now trial 47 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1697 Min. :1662 Min. :1370 Min. :-2552
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2331 Max. :2351 Max. :2477 Max. :-1679
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
253 77 111 62 3
Trial 47 done!
******************
***************
Doing now trial 48 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1658 Min. :1655 Min. :1334 Min. :-2577
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2316 Max. :2326 Max. :2458 Max. :-1704
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
200 47 98 51 4
Trial 48 done!
******************
***************
Doing now trial 49 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1685 Min. :1674 Min. :1360 Min. :-2548
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2325 Max. :2316 Max. :2499 Max. :-1669
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
252 58 136 56 2
Trial 49 done!
******************
***************
Doing now trial 50 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1687 Min. :1694 Min. :1421 Min. :-2563
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2312 Max. :2321 Max. :2461 Max. :-1706
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
183 33 79 64 7
Trial 50 done!
******************
***************
Doing now trial 51 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1641 Min. :1669 Min. :1418 Min. :-2560
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2303 Max. :2305 Max. :2464 Max. :-1713
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
182 36 78 63 5
Trial 51 done!
******************
***************
Doing now trial 52 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1670 Min. :1599 Min. :1200 Min. :-2620
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2282 Max. :2312 Max. :2488 Max. :-1673
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
186 42 75 60 9
Trial 52 done!
******************
***************
Doing now trial 53 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1611 Min. :1579 Min. :1316 Min. :-2594
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2346 Max. :2378 Max. :2460 Max. :-1664
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
237 100 90 42 5
Trial 53 done!
******************
***************
Doing now trial 54 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1620 Min. :1660 Min. :1349 Min. :-2583
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2313 Max. :2329 Max. :2457 Max. :-1722
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
187 29 82 68 8
Trial 54 done!
******************
***************
Doing now trial 55 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1637 Min. :1690 Min. :1383 Min. :-2556
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2295 Max. :2314 Max. :2455 Max. :-1672
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
205 28 118 54 5
Trial 55 done!
******************
***************
Doing now trial 56 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1653 Min. :1605 Min. :1174 Min. :-2602
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2307 Max. :2326 Max. :2453 Max. :-1697
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
197 42 102 51 2
Trial 56 done!
******************
***************
Doing now trial 57 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1666 Min. :1642 Min. :1381 Min. :-2569
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2283 Max. :2304 Max. :2460 Max. :-1717
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
271 65 145 54 7
Trial 57 done!
******************
***************
Doing now trial 58 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1659 Min. :1666 Min. :1380 Min. :-2569
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2410 Max. :2367 Max. :2516 Max. :-1676
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
263 79 119 60 5
Trial 58 done!
******************
***************
Doing now trial 59 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1671 Min. :1670 Min. :1344 Min. :-2527
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2322 Max. :2317 Max. :2480 Max. :-1707
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
200 42 94 62 2
Trial 59 done!
******************
***************
Doing now trial 60 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1610 Min. :1577 Min. :1172 Min. :-2588
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2066
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2300 Max. :2315 Max. :2493 Max. :-1737
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
232 57 115 50 10
Trial 60 done!
******************
***************
Doing now trial 61 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1674 Min. :1647 Min. :1392 Min. :-2556
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2314 Max. :2319 Max. :2476 Max. :-1670
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
233 60 104 68 1
Trial 61 done!
******************
***************
Doing now trial 62 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1581 Min. :1561 Min. :1221 Min. :-2654
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2321 Max. :2334 Max. :2482 Max. :-1704
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
238 92 79 64 3
Trial 62 done!
******************
***************
Doing now trial 63 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1710 Min. :1677 Min. :1395 Min. :-2539
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2292 Max. :2314 Max. :2442 Max. :-1705
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
220 34 100 77 9
Trial 63 done!
******************
***************
Doing now trial 64 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1613 Min. :1567 Min. :1238 Min. :-2566
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2320 Max. :2331 Max. :2480 Max. :-1733
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
210 63 81 56 10
Trial 64 done!
******************
***************
Doing now trial 65 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1693 Min. :1672 Min. :1415 Min. :-2545
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2298 Max. :2310 Max. :2458 Max. :-1697
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
256 65 110 73 8
Trial 65 done!
******************
***************
Doing now trial 66 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1683 Min. :1679 Min. :1390 Min. :-2556
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2313 Max. :2326 Max. :2457 Max. :-1696
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
222 63 113 43 3
Trial 66 done!
******************
***************
Doing now trial 67 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1692 Min. :1660 Min. :1404 Min. :-2565
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2302 Max. :2324 Max. :2511 Max. :-1706
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
198 52 103 43 0
Trial 67 done!
******************
***************
Doing now trial 68 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1696 Min. :1672 Min. :1429 Min. :-2498
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2080 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2343 Max. :2320 Max. :2504 Max. :-1728
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
188 19 72 87 10
Trial 68 done!
******************
***************
Doing now trial 69 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1679 Min. :1661 Min. :1395 Min. :-2528
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2361 Max. :2342 Max. :2486 Max. :-1692
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
200 49 97 50 4
Trial 69 done!
******************
***************
Doing now trial 70 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1667 Min. :1621 Min. :1412 Min. :-2543
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2327 Max. :2317 Max. :2462 Max. :-1709
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
211 60 80 66 5
Trial 70 done!
******************
***************
Doing now trial 71 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1670 Min. :1700 Min. :1379 Min. :-2542
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2324 Max. :2317 Max. :2507 Max. :-1728
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
216 55 103 49 9
Trial 71 done!
******************
***************
Doing now trial 72 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1649 Min. :1649 Min. :1357 Min. :-2558
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2299 Max. :2324 Max. :2452 Max. :-1723
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
189 48 71 65 5
Trial 72 done!
******************
***************
Doing now trial 73 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1692 Min. :1652 Min. :1385 Min. :-2549
1st Qu.:2014 1st Qu.:2016 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2050 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2296 Max. :2305 Max. :2443 Max. :-1712
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
200 49 96 51 4
Trial 73 done!
******************
***************
Doing now trial 74 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1688 Min. :1690 Min. :1404 Min. :-2520
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2293 Max. :2326 Max. :2522 Max. :-1711
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
204 44 90 70 0
Trial 74 done!
******************
***************
Doing now trial 75 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1676 Min. :1661 Min. :1398 Min. :-2577
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2317 Max. :2309 Max. :2513 Max. :-1717
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
183 50 69 53 11
Trial 75 done!
******************
***************
Doing now trial 76 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1672 Min. :1668 Min. :1369 Min. :-2565
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2290 Max. :2346 Max. :2472 Max. :-1715
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
215 59 98 47 11
Trial 76 done!
******************
***************
Doing now trial 77 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1687 Min. :1674 Min. :1367 Min. :-2543
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2336 Max. :2321 Max. :2485 Max. :-1712
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
233 47 101 80 5
Trial 77 done!
******************
***************
Doing now trial 78 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1694 Min. :1649 Min. :1369 Min. :-2543
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2297 Max. :2315 Max. :2482 Max. :-1704
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
221 51 112 51 7
Trial 78 done!
******************
***************
Doing now trial 79 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1630 Min. :1662 Min. :1334 Min. :-2558
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2048 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2350 Max. :2359 Max. :2521 Max. :-1684
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
272 105 97 67 3
Trial 79 done!
******************
***************
Doing now trial 80 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1660 Min. :1689 Min. :1417 Min. :-2538
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2289 Max. :2319 Max. :2501 Max. :-1694
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
238 44 109 79 6
Trial 80 done!
******************
***************
Doing now trial 81 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1685 Min. :1712 Min. :1343 Min. :-2563
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2330 Max. :2330 Max. :2492 Max. :-1718
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
218 42 112 58 6
Trial 81 done!
******************
***************
Doing now trial 82 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1689 Min. :1628 Min. :1398 Min. :-2551
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2293 Max. :2304 Max. :2445 Max. :-1712
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
213 37 102 66 8
Trial 82 done!
******************
***************
Doing now trial 83 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1692 Min. :1685 Min. :1393 Min. :-2544
1st Qu.:2015 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2290 Max. :2324 Max. :2497 Max. :-1712
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
185 24 92 63 6
Trial 83 done!
******************
***************
Doing now trial 84 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1677 Min. :1719 Min. :1379 Min. :-2573
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2082 3rd Qu.:-2008
Max. :2277 Max. :2321 Max. :2457 Max. :-1735
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
179 20 85 69 5
Trial 84 done!
******************
***************
Doing now trial 85 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1695 Min. :1657 Min. :1397 Min. :-2536
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2343 Max. :2350 Max. :2507 Max. :-1708
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
212 47 96 62 7
Trial 85 done!
******************
***************
Doing now trial 86 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1641 Min. :1593 Min. :1133 Min. :-2558
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2339 Max. :2351 Max. :2486 Max. :-1716
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
213 44 107 57 5
Trial 86 done!
******************
***************
Doing now trial 87 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1672 Min. :1666 Min. :1276 Min. :-2538
1st Qu.:2014 1st Qu.:2016 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2050 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2333 Max. :2336 Max. :2484 Max. :-1729
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
214 56 95 59 4
Trial 87 done!
******************
***************
Doing now trial 88 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1642 Min. :1683 Min. :1386 Min. :-2554
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2323 Max. :2325 Max. :2525 Max. :-1719
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
228 63 105 53 7
Trial 88 done!
******************
***************
Doing now trial 89 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1628 Min. :1620 Min. :1389 Min. :-2498
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2082 3rd Qu.:-2008
Max. :2455 Max. :2321 Max. :2516 Max. :-1717
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
178 33 69 71 5
Trial 89 done!
******************
***************
Doing now trial 90 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1674 Min. :1690 Min. :1307 Min. :-2517
1st Qu.:2014 1st Qu.:2016 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2316 Max. :2367 Max. :2461 Max. :-1755
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
228 49 107 66 6
Trial 90 done!
******************
***************
Doing now trial 91 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1638 Min. :1665 Min. :1198 Min. :-2568
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2050 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2305 Max. :2325 Max. :2482 Max. :-1741
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
280 88 119 71 2
Trial 91 done!
******************
***************
Doing now trial 92 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1593 Min. :1578 Min. :1218 Min. :-2602
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2080 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2276 Max. :2306 Max. :2498 Max. :-1709
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
177 19 54 97 7
Trial 92 done!
******************
***************
Doing now trial 93 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1629 Min. :1679 Min. :1362 Min. :-2552
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2339 Max. :2338 Max. :2486 Max. :-1720
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
212 60 86 57 9
Trial 93 done!
******************
***************
Doing now trial 94 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1656 Min. :1625 Min. :1372 Min. :-2528
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2354 Max. :2316 Max. :2497 Max. :-1724
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
191 32 95 58 6
Trial 94 done!
******************
***************
Doing now trial 95 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1686 Min. :1646 Min. :1338 Min. :-2552
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2351 Max. :2351 Max. :2495 Max. :-1698
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
217 63 82 65 7
Trial 95 done!
******************
***************
Doing now trial 96 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1639 Min. :1673 Min. :1329 Min. :-2521
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2285 Max. :2372 Max. :2484 Max. :-1714
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
216 71 73 66 6
Trial 96 done!
******************
***************
Doing now trial 97 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1658 Min. :1657 Min. :1405 Min. :-2551
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2330 Max. :2335 Max. :2513 Max. :-1656
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
242 106 85 46 5
Trial 97 done!
******************
***************
Doing now trial 98 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1685 Min. :1681 Min. :1340 Min. :-2611
1st Qu.:2015 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:-2008
Max. :2305 Max. :2308 Max. :2475 Max. :-1742
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
171 13 98 54 6
Trial 98 done!
******************
***************
Doing now trial 99 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1656 Min. :1673 Min. :1343 Min. :-2531
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2317 Max. :2310 Max. :2526 Max. :-1725
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
174 35 85 48 6
Trial 99 done!
******************
***************
Doing now trial 100 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1628 Min. :1650 Min. :1367 Min. :-2550
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2299 Max. :2334 Max. :2472 Max. :-1720
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
221 66 101 54 0
Trial 100 done!
******************
***************
Doing now trial 101 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1677 Min. :1604 Min. :1268 Min. :-2516
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2300 Max. :2318 Max. :2473 Max. :-1694
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
228 62 93 69 4
Trial 101 done!
******************
***************
Doing now trial 102 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1656 Min. :1667 Min. :1400 Min. :-2516
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2350 Max. :2321 Max. :2480 Max. :-1710
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
242 90 74 68 10
Trial 102 done!
******************
***************
Doing now trial 103 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1684 Min. :1667 Min. :1387 Min. :-2511
1st Qu.:2015 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2310 Max. :2311 Max. :2494 Max. :-1720
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
195 37 73 82 3
Trial 103 done!
******************
***************
Doing now trial 104 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1631 Min. :1614 Min. :1373 Min. :-2586
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2050 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2037
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2084 3rd Qu.:-2007
Max. :2336 Max. :2304 Max. :2493 Max. :-1705
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
249 77 104 63 5
Trial 104 done!
******************
***************
Doing now trial 105 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1698 Min. :1649 Min. :1408 Min. :-2540
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2299 Max. :2303 Max. :2458 Max. :-1744
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
191 53 86 48 4
Trial 105 done!
******************
***************
Doing now trial 106 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1673 Min. :1652 Min. :1340 Min. :-2524
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2327 Max. :2302 Max. :2438 Max. :-1709
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
237 82 92 62 1
Trial 106 done!
******************
***************
Doing now trial 107 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1679 Min. :1609 Min. :1210 Min. :-2565
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2345 Max. :2322 Max. :2468 Max. :-1741
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
236 65 94 67 10
Trial 107 done!
******************
***************
Doing now trial 108 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1676 Min. :1656 Min. :1339 Min. :-2530
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2328 Max. :2318 Max. :2474 Max. :-1720
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
194 54 82 50 8
Trial 108 done!
******************
***************
Doing now trial 109 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1716 Min. :1679 Min. :1431 Min. :-2489
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2322 Max. :2325 Max. :2449 Max. :-1738
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
183 47 66 64 6
Trial 109 done!
******************
***************
Doing now trial 110 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1679 Min. :1672 Min. :1379 Min. :-2544
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2037
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2292 Max. :2317 Max. :2488 Max. :-1759
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
180 30 56 89 5
Trial 110 done!
******************
***************
Doing now trial 111 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1673 Min. :1657 Min. :1357 Min. :-2541
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2037
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2319 Max. :2310 Max. :2475 Max. :-1720
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
206 35 93 72 6
Trial 111 done!
******************
***************
Doing now trial 112 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1653 Min. :1618 Min. :1178 Min. :-2575
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2066
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2307 Max. :2327 Max. :2467 Max. :-1734
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
260 85 116 48 11
Trial 112 done!
******************
***************
Doing now trial 113 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1672 Min. :1669 Min. :1366 Min. :-2521
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2037
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2350 Max. :2302 Max. :2510 Max. :-1718
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
255 68 111 71 5
Trial 113 done!
******************
***************
Doing now trial 114 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1683 Min. :1632 Min. :1383 Min. :-2549
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2007
Max. :2358 Max. :2313 Max. :2471 Max. :-1724
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
246 56 122 59 9
Trial 114 done!
******************
***************
Doing now trial 115 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1703 Min. :1703 Min. :1403 Min. :-2574
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2037
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2295 Max. :2311 Max. :2492 Max. :-1741
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
224 49 120 52 3
Trial 115 done!
******************
***************
Doing now trial 116 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1623 Min. :1579 Min. :1258 Min. :-2578
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2048 Median :2049 Median :2052 Median :-2036
Mean :2047 Mean :2048 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2084 3rd Qu.:-2007
Max. :2323 Max. :2376 Max. :2493 Max. :-1725
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
250 108 90 40 12
Trial 116 done!
******************
***************
Doing now trial 117 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1710 Min. :1668 Min. :1408 Min. :-2530
1st Qu.:2014 1st Qu.:2015 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2037
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2301 Max. :2326 Max. :2431 Max. :-1731
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
194 30 98 59 7
Trial 117 done!
******************
***************
Doing now trial 118 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1708 Min. :1701 Min. :1412 Min. :-2482
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2082 3rd Qu.:-2008
Max. :2296 Max. :2287 Max. :2461 Max. :-1757
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
160 12 75 69 4
Trial 118 done!
******************
***************
Doing now trial 119 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1687 Min. :1678 Min. :1383 Min. :-2509
1st Qu.:2014 1st Qu.:2016 1st Qu.:2020 1st Qu.:-2065
Median :2047 Median :2049 Median :2051 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2082 3rd Qu.:2083 3rd Qu.:-2008
Max. :2294 Max. :2321 Max. :2461 Max. :-1735
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
220 36 110 65 9
Trial 119 done!
******************
***************
Doing now trial 120 of Cherry
The five number summary is:
ch10 ch11 ch13 ch14
Min. :1655 Min. :1634 Min. :1295 Min. :-2575
1st Qu.:2014 1st Qu.:2015 1st Qu.:2019 1st Qu.:-2065
Median :2047 Median :2050 Median :2052 Median :-2036
Mean :2047 Mean :2049 Mean :2051 Mean :-2036
3rd Qu.:2081 3rd Qu.:2083 3rd Qu.:2083 3rd Qu.:-2007
Max. :2295 Max. :2323 Max. :2508 Max. :-1736
Global counts at classification's end:
Total Cluster 1 Cluster 2 Cluster 3 ?
255 99 99 50 7
Trial 120 done!
******************
5.2 Diagnostic plots
The counts evolution is:
counts_evolution(a_Cherry_tetD)
Figure 13: Evolution of the number of events attributed to each unit (1 to 3) or unclassified ("?") during the 120A trials of Cherry for tetrode D.
The waveform evolution is:
waveform_evolution(a_Cherry_tetD,threshold_factor)
Figure 14: Evolution of the templates of each unit during the 120 trials of Cherry for tetrode D.
The observed counting processes, inter spike intervals densities and raster plots are:
cp_isi_raster(a_Cherry_tetD)
Figure 15: Observed counting processes, empirical inter spike interval distributions and raster plots for Cherry.
5.3 Save results
Before analyzing the next set of trials we save the output of sort_many_trials to disk with:
save(a_Cherry_tetD,
file=paste0("tetD_analysis/tetD_","Cherry","_summary_obj.rda"))
We write to disk the spike trains in text mode:
for (c_idx in 1:length(a_Cherry_tetD$spike_trains))
cat(a_Cherry_tetD$spike_trains[[c_idx]],
file=paste0("locust20000214_spike_trains/locust20000214_Cherry_tetD_u",c_idx,".txt"),sep="\n")
6 60 trials with Octaldehyde
We will carry out an analysis of the 60 trials from Octaldehyde. There are some brief but large artifacts during trials 11, 12 and 13 (undocumented in the LabBook), so we exclude those from the analysis.
6.1 Do the job
stim_name = "Octaldehyde"
a_Octaldehyde_tetD=smt(stim_name=stim_name,
trial_nbs=c(1:10,14:60),
centers=a_Cherry_tetD$centers,
counts=a_Cherry_tetD$counts)
6.2 Diagnostic plots
The counts evolution is:
Figure 16: Evolution of the number of events attributed to each unit (1 to 3) or unclassified ("?") during the 60 trials of Octaldehyde for tetrodeD.
The waveform evolution is:
Figure 17: Evolution of the templates of each unit during the 60 trials of Octaldehyde for tetrodeD.
The observed counting processes, inter spike intervals densities and raster plots are:
Figure 18: Observed counting processes, empirical inter spike interval distributions and raster plots for Octaldehyde.
6.3 Save results
Before analyzing the next set of trials we save the output of sort_many_trials to disk with:
save(a_Octaldehyde_tetD,
file=paste0("tetD_analysis/tetD_",stim_name,"_summary_obj.rda"))
We write to disk the spike trains in text mode:
for (c_idx in 1:length(a_Octaldehyde_tetD$spike_trains))
if (!is.null(a_Octaldehyde_tetD$spike_trains[[c_idx]]))
cat(a_Octaldehyde_tetD$spike_trains[[c_idx]],file=paste0("locust20000214_spike_trains/locust20000214_Octaldehyde_tetD_u",c_idx,".txt"),sep="\n")